Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EPS91_23650 | Not Available | Negative | 4794103 - 4794522 | 16272.6 |
| cro/cl family transcriptional regulator | EPS91_23655 | Not Available | Positive | 4794623 - 4794904 | 10601.7 |
| rha family transcriptional regulator | EPS91_23660 | Not Available | Positive | 4794888 - 4795313 | 16096.5 |
| helix-turn-helix domain-containing protein | EPS91_23665 | Not Available | Positive | 4795336 - 4796298 | 35933.6 |
| dna replication protein dnac | EPS91_23670 | Not Available | Positive | 4796305 - 4797051 | 27992.8 |
| duf1627 domain-containing protein | EPS91_23675 | Not Available | Positive | 4797073 - 4797843 | 28115.6 |
| duf977 family protein | EPS91_23680 | Not Available | Positive | 4797859 - 4798284 | 16546.1 |
| epoxyqueuosine reductase queh | EPS91_23685 | Not Available | Positive | 4798459 - 4799124 | 25866.8 |
| type i toxin-antitoxin system hok family toxin | EPS91_23690 | Not Available | Positive | 4799305 - 4799517 | 7808.85 |
| hypothetical protein | EPS91_23695 | Not Available | Negative | 4799559 - 4799738 | 6548.11 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





