Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | EPS91_22625 | Not Available | Positive | 4599229 - 4600047 | 29354.3 |
| duf1488 domain-containing protein | EPS91_22630 | Not Available | Positive | 4600044 - 4600301 | 10035.6 |
| gamma carbonic anhydrase family protein | EPS91_22635 | Not Available | Negative | 4600277 - 4600831 | 20260.3 |
| hypothetical protein | EPS91_22640 | Not Available | Positive | 4601148 - 4601375 | 9059.28 |
| hypothetical protein | EPS91_22645 | Not Available | Positive | 4601385 - 4601672 | 10719.2 |
| protein-serine/threonine phosphatase | EPS91_22650 | Not Available | Positive | 4602151 - 4602807 | 25459.6 |
| duf1482 family protein | EPS91_22655 | Not Available | Negative | 4602808 - 4602999 | 7324.62 |
| duf1480 family protein | EPS91_22660 | Not Available | Negative | 4603104 - 4603340 | 8753.26 |
| 16s rrna (cytosine(1407)-c(5))-methyltransferase rsmf | EPS91_22665 | Not Available | Negative | 4603458 - 4604897 | 53256.6 |
| pqib family protein | EPS91_22670 | Not Available | Negative | 4604977 - 4607610 | 94887.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





