Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome alternative rescue factor arfa | EPS91_22575 | Not Available | Positive | 4591418 - 4591636 | 8199.88 |
| large-conductance mechanosensitive channel protein mscl | EPS91_22580 | Not Available | Negative | 4591633 - 4592043 | 14957.7 |
| trk system potassium transporter trka | EPS91_22585 | Not Available | Negative | 4592173 - 4593549 | 50370.8 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | EPS91_22590 | Not Available | Negative | 4593571 - 4594860 | 48294.1 |
| methionyl-trna formyltransferase | EPS91_22595 | Not Available | Negative | 4594906 - 4595853 | 34156.4 |
| peptide deformylase | EPS91_22600 | Not Available | Negative | 4595868 - 4596377 | 19343.6 |
| dna-protecting protein dpra | EPS91_22605 | Not Available | Positive | 4596507 - 4597631 | 40995.3 |
| duf494 domain-containing protein | EPS91_22610 | Not Available | Positive | 4597603 - 4598076 | 18484.2 |
| hypothetical protein | EPS91_22615 | Not Available | Positive | 4598105 - 4598647 | 19874.0 |
| l-threonylcarbamoyladenylate synthase type 1 tsac | EPS91_22620 | Not Available | Positive | 4598652 - 4599224 | 20641.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





