Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trah | EPS91_22225 | Not Available | Negative | 4551911 - 4553284 | 50509.6 |
| conjugal transfer protein trbf | EPS91_22230 | Not Available | Negative | 4553271 - 4553696 | 17116.8 |
| p-type conjugative transfer protein trbj | EPS91_22235 | Not Available | Negative | 4553644 - 4553985 | 12803.8 |
| type-f conjugative transfer system pilin assembly thiol-disulfide isomerase trbb | EPS91_22240 | Not Available | Negative | 4553915 - 4554460 | 20032.3 |
| type-f conjugative transfer system pilin chaperone traq | EPS91_22245 | Not Available | Negative | 4554447 - 4554731 | 10770.3 |
| conjugal transfer protein trba | EPS91_22250 | Not Available | Negative | 4554858 - 4555196 | 12758.2 |
| type-f conjugative transfer system pilin assembly protein traf | EPS91_22255 | Not Available | Negative | 4555212 - 4555955 | 27976.6 |
| conjugal transfer protein trbe | EPS91_22260 | Not Available | Negative | 4555948 - 4556205 | 9810.96 |
| type-f conjugative transfer system mating-pair stabilization protein tran | EPS91_22265 | Not Available | Negative | 4556232 - 4558082 | 66681.1 |
| type-f conjugative transfer system pilin assembly protein trbc | EPS91_22270 | Not Available | Negative | 4558079 - 4558717 | 23587.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





