Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane lipoprotein slp | EPS91_22070 | Not Available | Negative | 4515808 - 4516374 | 20949.1 |
| hypothetical protein | EPS91_22075 | Not Available | Negative | 4516620 - 4517843 | 47455.0 |
| hypothetical protein | EPS91_22080 | Not Available | Negative | 4518405 - 4518465 | 2293.74 |
| trimeric intracellular cation channel family protein | EPS91_22090 | Not Available | Positive | 4519712 - 4520329 | 22049.8 |
| nad-dependent dna ligase ligb | EPS91_22095 | Not Available | Negative | 4520326 - 4522008 | 63225.8 |
| guanylate kinase | EPS91_22100 | Not Available | Positive | 4522266 - 4522889 | 23594.1 |
| dna-directed rna polymerase subunit omega | EPS91_22105 | Not Available | Positive | 4522944 - 4523219 | 10237.2 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | EPS91_22110 | Not Available | Positive | 4523238 - 4525346 | 79347.1 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | EPS91_22115 | Not Available | Positive | 4525353 - 4526042 | 25405.7 |
| atp-dependent dna helicase recg | EPS91_22120 | Not Available | Positive | 4526048 - 4528129 | 76513.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





