Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deda family protein | EPS91_21265 | Not Available | Negative | 4373644 - 4374222 | 21461.9 |
| yip1 family protein | EPS91_21270 | Not Available | Positive | 4374392 - 4374979 | 21692.0 |
| d-alanyl-d-alanine endopeptidase | EPS91_21275 | Not Available | Positive | 4375153 - 4376085 | 33889.4 |
| d-lactate dehydrogenase | EPS91_21280 | Not Available | Negative | 4376124 - 4377839 | 64680.0 |
| beta-glucosidase bglx | EPS91_21285 | Not Available | Positive | 4378035 - 4380332 | 83533.8 |
| abc transporter substrate-binding protein | EPS91_21290 | Not Available | Positive | 4380584 - 4381501 | 32437.8 |
| abc transporter permease | EPS91_21295 | Not Available | Positive | 4381508 - 4382665 | 41208.3 |
| porin ompc | EPS91_21455 | Not Available | Negative | 4399282 - 4400364 | 39597.5 |
| hypothetical protein | EPS91_21460 | Not Available | Positive | 4400573 - 4400824 | 9744.27 |
| hypothetical protein | EPS91_21465 | Not Available | Negative | 4400734 - 4400916 | 6583.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





