Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybab/ebfc family nucleoid-associated protein | EPS91_21160 | Not Available | Negative | 4352284 - 4352613 | 12015.6 |
| dna polymerase iii subunit gamma/tau | EPS91_21165 | Not Available | Negative | 4352666 - 4354597 | 71111.7 |
| adenine phosphoribosyltransferase | EPS91_21170 | Not Available | Negative | 4354726 - 4355277 | 19802.0 |
| duf454 family protein | EPS91_21175 | Not Available | Negative | 4355430 - 4355807 | 14771.0 |
| primosomal replication protein n'' | EPS91_21180 | Not Available | Positive | 4355877 - 4356404 | 20360.5 |
| duf2496 domain-containing protein | EPS91_21185 | Not Available | Positive | 4356418 - 4356579 | 6094.32 |
| mechanosensitive channel msck | EPS91_21190 | Not Available | Negative | 4356791 - 4360153 | 127253.0 |
| multidrug efflux transporter transcriptional repressor acrr | EPS91_21195 | Not Available | Negative | 4360281 - 4360928 | 24768.1 |
| multidrug efflux rnd transporter periplasmic adaptor subunit acra | EPS91_21200 | Not Available | Positive | 4361070 - 4362263 | 42169.1 |
| multidrug efflux rnd transporter permease subunit | EPS91_21205 | Not Available | Positive | 4362286 - 4365435 | 113557.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





