Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tagaturonate reductase | EPS91_20955 | Not Available | Negative | 4308787 - 4310238 | 54853.4 |
| diguanylate cyclase | EPS91_20960 | Not Available | Negative | 4310466 - 4311884 | 52079.4 |
| duf4186 domain-containing protein | EPS91_20965 | Not Available | Negative | 4312023 - 4312382 | 13556.5 |
| glutaminase | EPS91_20970 | Not Available | Negative | 4312382 - 4313308 | 33575.6 |
| succinate-semialdehyde dehydrogenase | EPS91_20975 | Not Available | Negative | 4313372 - 4314760 | 49764.7 |
| lysr family transcriptional regulator | EPS91_20980 | Not Available | Positive | 4314861 - 4315742 | 32434.8 |
| putative protein ynek | EPS91_20985 | Not Available | Positive | 4315820 - 4316935 | 42914.8 |
| sugar transporter | EPS91_20990 | Not Available | Positive | 4317085 - 4318275 | 42600.9 |
| naat family transporter marc | EPS91_20995 | Not Available | Negative | 4318300 - 4318965 | 23618.7 |
| multiple antibiotic resistance transcriptional regulator marr | EPS91_21000 | Not Available | Positive | 4319177 - 4319611 | 16070.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





