Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| addiction module toxin, gnsa/gnsb family | EPS91_20875 | Not Available | Negative | 4301681 - 4301854 | 6575.99 |
| protein ymce | EPS91_20880 | Not Available | Negative | 4301844 - 4302074 | 8779.69 |
| cold-shock protein | EPS91_20885 | Not Available | Negative | 4302049 - 4302237 | 7118.58 |
| cold shock protein cspg | EPS91_20890 | Not Available | Negative | 4302248 - 4302460 | 7781.14 |
| hypothetical protein | EPS91_20895 | Not Available | Negative | 4302689 - 4302748 | 2293.74 |
| type 1 fimbrial protein | EPS91_20900 | Not Available | Negative | 4302810 - 4302974 | 5804.02 |
| type ii toxin-antitoxin system antitoxin hipb | EPS91_20915 | Not Available | Negative | 4303531 - 4303797 | 10075.0 |
| (4s)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase | EPS91_20940 | Not Available | Positive | 4306567 - 4306857 | 11239.4 |
| trans-aconitate 2-methyltransferase | EPS91_20945 | Not Available | Positive | 4306914 - 4307672 | 29042.4 |
| bestrophin family inner membrane protein | EPS91_20950 | Not Available | Negative | 4307676 - 4308590 | 34811.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





