Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate synthase a | EPS91_20385 | Not Available | Positive | 4227839 - 4229440 | 60307.0 |
| isocitrate lyase | EPS91_20390 | Not Available | Positive | 4229470 - 4230774 | 47524.1 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | EPS91_20395 | Not Available | Positive | 4230958 - 4232682 | 67120.6 |
| glyoxylate bypass operon transcriptional repressor iclr | EPS91_20400 | Not Available | Negative | 4232699 - 4233523 | 29741.1 |
| methionine synthase | EPS91_20405 | Not Available | Positive | 4233723 - 4237406 | 136142.0 |
| na/pi cotransporter family protein | EPS91_20410 | Not Available | Positive | 4237626 - 4239257 | 59494.8 |
| dipeptidase pepe | EPS91_20415 | Not Available | Negative | 4239347 - 4240036 | 24571.7 |
| shikimate 5-dehydrogenase | EPS91_20420 | Not Available | Negative | 4240159 - 4240971 | 29122.1 |
| l-sorbose 1-phosphate reductase | EPS91_20425 | Not Available | Negative | 4240964 - 4242193 | 44746.1 |
| pts system mannose/fructose/sorbose family transporter subunit iid | EPS91_20430 | Not Available | Negative | 4242245 - 4243069 | 29457.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





