Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor 4 | EPS91_20075 | Not Available | Negative | 4164377 - 4166176 | 66574.1 |
| soxr-reducing system protein rsec | EPS91_20080 | Not Available | Negative | 4166374 - 4166853 | 16641.3 |
| sigma-e factor regulatory protein rseb | EPS91_20085 | Not Available | Negative | 4166850 - 4167806 | 35751.8 |
| anti-sigma-e factor rsea | EPS91_20090 | Not Available | Negative | 4167806 - 4168456 | 24349.8 |
| rna polymerase sigma factor rpoe | EPS91_20095 | Not Available | Negative | 4168489 - 4169064 | 21697.0 |
| rpoe leader peptide rsed | EPS91_20100 | Not Available | Negative | 4169061 - 4169216 | 6229.83 |
| l-aspartate oxidase | EPS91_20105 | Not Available | Positive | 4169472 - 4171094 | 60196.8 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase | EPS91_20110 | Not Available | Negative | 4171079 - 4171816 | 27331.5 |
| atp-dependent rna helicase srmb | EPS91_20115 | Not Available | Positive | 4171948 - 4173282 | 49901.0 |
| lysr family transcriptional regulator | EPS91_20120 | Not Available | Negative | 4173491 - 4174372 | 33285.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





