Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EPS91_19720 | Not Available | Positive | 4089641 - 4090576 | 34424.7 |
| aspartate/glutamate racemase | EPS91_19725 | Not Available | Negative | 4090563 - 4091255 | 25295.5 |
| sugar porter family mfs transporter | EPS91_19730 | Not Available | Negative | 4091384 - 4092802 | 51603.5 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | EPS91_19735 | Not Available | Negative | 4093117 - 4093878 | 27056.7 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | EPS91_19740 | Not Available | Negative | 4093908 - 4094744 | 31078.1 |
| acetyl-coa c-acetyltransferase | EPS91_19745 | Not Available | Negative | 4095031 - 4096212 | 40947.1 |
| haaap family serine/threonine permease | EPS91_19750 | Not Available | Positive | 4096467 - 4097696 | 45116.0 |
| hypothetical protein | EPS91_19755 | Not Available | Positive | 4098156 - 4098386 | 8706.42 |
| Trna-pseudo | Not Available | Not Available | Positive | 4098453 - 4098529 | Not Available |
| 16s rrna (guanine(1207)-n(2))-methyltransferase rsmc | EPS91_19760 | Not Available | Negative | 4098842 - 4099873 | 37642.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





