Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinone biosynthesis protein ubij | EPS91_19415 | Not Available | Negative | 4021341 - 4021946 | 22123.8 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | EPS91_19420 | Not Available | Negative | 4021960 - 4022715 | 28074.8 |
| dna recombination protein rmuc | EPS91_19425 | Not Available | Negative | 4022810 - 4024237 | 54767.6 |
| iclr family transcriptional regulator | EPS91_19430 | Not Available | Positive | 4024454 - 4025221 | 28328.0 |
| 2-dehydro-3-deoxygalactonokinase | EPS91_19435 | Not Available | Positive | 4025245 - 4026249 | 36438.6 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | EPS91_19440 | Not Available | Positive | 4026239 - 4026868 | 22276.3 |
| tripartite tricarboxylate transporter substrate binding protein | EPS91_19445 | Not Available | Positive | 4026893 - 4027867 | 34136.4 |
| tripartite tricarboxylate transporter tctb family protein | EPS91_19450 | Not Available | Positive | 4027884 - 4028390 | 18051.8 |
| c4-dicarboxylate abc transporter permease | EPS91_19455 | Not Available | Positive | 4028403 - 4029893 | 51795.2 |
| uridine phosphorylase | EPS91_19460 | Not Available | Negative | 4029927 - 4030691 | 27288.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





