Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts fructose transporter subunit iic | EPS91_19250 | Not Available | Positive | 3984846 - 3986093 | 43914.0 |
| aminopeptidase | EPS91_19260 | Not Available | Positive | 3987192 - 3988229 | 37515.3 |
| phosphoenolpyruvate--protein phosphotransferase | EPS91_19265 | Not Available | Positive | 3988254 - 3990749 | 92018.2 |
| response regulator transcription factor | EPS91_19275 | Not Available | Negative | 3991622 - 3992356 | 28722.6 |
| sensor histidine kinase | EPS91_19280 | Not Available | Negative | 3992371 - 3994068 | 62661.3 |
| alanine transaminase | EPS91_19285 | Not Available | Positive | 3994445 - 3995683 | 46218.8 |
| membrane protein ypdk | EPS91_19290 | Not Available | Negative | 3995748 - 3995819 | 2704.57 |
| kdo(2)-lipid iv(a) palmitoleoyltransferase | EPS91_19295 | Not Available | Negative | 3996175 - 3997095 | 35481.5 |
| duf2545 family protein | EPS91_19300 | Not Available | Positive | 3997448 - 3997690 | 8923.5 |
| hypothetical protein | EPS91_19305 | Not Available | Negative | 3997767 - 3998042 | 10123.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





