Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EPS91_18890 | Not Available | Negative | 3915979 - 3916194 | 8114.98 |
| acid stress response protein yqgb | EPS91_18895 | Not Available | Positive | 3916330 - 3916461 | 4859.08 |
| biosynthetic arginine decarboxylase | EPS91_18900 | Not Available | Positive | 3916470 - 3918446 | 73890.6 |
| hypothetical protein | EPS91_18905 | Not Available | Positive | 3918592 - 3919323 | 26304.6 |
| agmatinase | EPS91_18910 | Not Available | Positive | 3919459 - 3920379 | 33558.9 |
| transcriptional regulator dagr | EPS91_18915 | Not Available | Positive | 3920637 - 3923435 | 105355.0 |
| pts sugar transporter subunit iia | EPS91_18920 | Not Available | Positive | 3923554 - 3923982 | 15222.6 |
| pts system mannose/fructose/n-acetylgalactosamine-transporter subunit iib | EPS91_18925 | Not Available | Positive | 3923993 - 3924478 | 17568.2 |
| pts sugar transporter subunit iic | EPS91_18930 | Not Available | Positive | 3924504 - 3925253 | 26763.9 |
| pts system mannose/fructose/sorbose family transporter subunit iid | EPS91_18935 | Not Available | Positive | 3925253 - 3926110 | 30660.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





