Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine--undecaprenyl-phosphate n-acetylglucosaminephosphotransferase | EPS91_18630 | Not Available | Positive | 3867726 - 3868829 | 40993.7 |
| eca polysaccharide chain length modulation protein | EPS91_18635 | Not Available | Positive | 3868841 - 3869887 | 39462.3 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | EPS91_18640 | Not Available | Positive | 3869943 - 3871073 | 42211.0 |
| udp-n-acetyl-d-mannosamine dehydrogenase | EPS91_18645 | Not Available | Positive | 3871070 - 3872332 | 45826.3 |
| dtdp-glucose 4,6-dehydratase | EPS91_18650 | Not Available | Positive | 3872332 - 3873399 | 39836.1 |
| glucose-1-phosphate thymidylyltransferase | EPS91_18655 | Not Available | Positive | 3873418 - 3874299 | 32709.2 |
| dtdp-4-amino-4,6-dideoxy-d-galactose acyltransferase | EPS91_18660 | Not Available | Positive | 3874277 - 3874951 | 24175.6 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | EPS91_18665 | Not Available | Positive | 3874956 - 3876086 | 41979.5 |
| lipid iii flippase wzxe | EPS91_18670 | Not Available | Positive | 3876088 - 3877338 | 45050.5 |
| tdp-n-acetylfucosamine:lipid ii n-acetylfucosaminyltransferase | EPS91_18675 | Not Available | Positive | 3877335 - 3878414 | 40601.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





