Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucans biosynthesis protein mdog | EPS91_18055 | Not Available | Negative | 3735820 - 3737355 | 57885.4 |
| glucans biosynthesis protein mdoc | EPS91_18060 | Not Available | Positive | 3737749 - 3738906 | 44731.0 |
| phospholipase d family protein | EPS91_18065 | Not Available | Negative | 3738914 - 3740395 | 55960.7 |
| o-acetyl-adp-ribose deacetylase | EPS91_18070 | Not Available | Negative | 3740337 - 3740870 | 18936.6 |
| type 1 fimbrial protein | EPS91_18075 | Not Available | Negative | 3740965 - 3741276 | 11184.6 |
| curli assembly protein csgc | EPS91_18080 | Not Available | Negative | 3741397 - 3741729 | 11955.3 |
| major curlin subunit csga | EPS91_18085 | Not Available | Negative | 3741787 - 3742242 | 14993.0 |
| curlin minor subunit csgb | EPS91_18090 | Not Available | Negative | 3742283 - 3742738 | 15909.8 |
| transcriptional regulator csgd | EPS91_18095 | Not Available | Positive | 3743493 - 3744143 | 24931.0 |
| curli production assembly/transport protein csge | EPS91_18100 | Not Available | Positive | 3744148 - 3744537 | 14879.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





