Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system antitoxin dinj | EPS91_17950 | Not Available | Positive | 3717494 - 3717754 | 9334.27 |
| type ii toxin-antitoxin system mrna interferase toxin yafq | EPS91_17955 | Not Available | Positive | 3717757 - 3718035 | 10847.3 |
| murein l,d-transpeptidase | EPS91_17960 | Not Available | Positive | 3718191 - 3718931 | 28022.8 |
| class ii glutamine amidotransferase | EPS91_17965 | Not Available | Negative | 3718902 - 3719669 | 28651.2 |
| d-sedoheptulose 7-phosphate isomerase | EPS91_17970 | Not Available | Negative | 3719785 - 3720363 | 20802.0 |
| acyl-coa dehydrogenase | EPS91_17975 | Not Available | Positive | 3720603 - 3723047 | 89230.7 |
| c-lysozyme inhibitor | EPS91_17980 | Not Available | Negative | 3723090 - 3723563 | 16873.2 |
| 2-oxoglutaramate amidase | EPS91_17985 | Not Available | Positive | 3723717 - 3724487 | 28958.6 |
| Trna-asp | Not Available | Not Available | Positive | 3724586 - 3724662 | Not Available |
| dna polymerase iii subunit epsilon | EPS91_17995 | Not Available | Negative | 3724795 - 3725526 | 27130.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





