Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EPS91_16590 | Not Available | Negative | 3470031 - 3470102 | 2617.29 |
| isopentenyl-diphosphate delta-isomerase | EPS91_16595 | Not Available | Positive | 3470157 - 3470705 | 20315.9 |
| lysine--trna ligase | EPS91_16600 | Not Available | Negative | 3470748 - 3472265 | 57569.7 |
| peptide chain release factor 2 | EPS91_16605 | Not Available | Negative | 3472275 - 3473373 | 41222.9 |
| single-stranded-dna-specific exonuclease recj | EPS91_16610 | Not Available | Negative | 3473464 - 3475197 | 63318.5 |
| bifunctional protein-disulfide isomerase/oxidoreductase dsbc | EPS91_16615 | Not Available | Negative | 3475203 - 3475913 | 25663.2 |
| tyrosine recombinase xerd | EPS91_16620 | Not Available | Negative | 3475938 - 3476834 | 34248.4 |
| flavodoxin fldb | EPS91_16625 | Not Available | Positive | 3476946 - 3477467 | 19701.2 |
| hypothetical protein | EPS91_16630 | Not Available | Negative | 3477507 - 3477914 | 16095.0 |
| fad assembly factor sdhe | EPS91_16635 | Not Available | Negative | 3477895 - 3478161 | 10547.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





