Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent transcriptional regulator | EPS91_16490 | Not Available | Negative | 3441279 - 3443057 | 65997.9 |
| knotted carbamoyltransferase ygew | EPS91_16495 | Not Available | Positive | 3443536 - 3444723 | 44058.7 |
| diaminopropionate ammonia-lyase | EPS91_16500 | Not Available | Positive | 3444781 - 3445977 | 43330.1 |
| ygey family selenium metabolism-linked hydrolase | EPS91_16505 | Not Available | Positive | 3446035 - 3447246 | 44806.4 |
| d-phenylhydantoinase | EPS91_16510 | Not Available | Positive | 3447299 - 3448684 | 51032.1 |
| carbamate kinase | EPS91_16515 | Not Available | Positive | 3448732 - 3449664 | 33087.0 |
| ef2563 family selenium-dependent molybdenum hydroxylase system protein | EPS91_16520 | Not Available | Negative | 3449705 - 3451330 | 57699.4 |
| putative selenium-dependent hydroxylase accessory protein yqec | EPS91_16525 | Not Available | Negative | 3451378 - 3452148 | 28263.2 |
| molybdenum cofactor cytidylyltransferase | EPS91_16530 | Not Available | Positive | 3452252 - 3452830 | 21527.2 |
| putative selenate reductase subunit ygfk | EPS91_16535 | Not Available | Positive | 3453152 - 3456250 | 115585.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





