Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yopn family type iii secretion system gatekeeper subunit | EPS91_16440 | Not Available | Negative | 3430222 - 3431367 | 43518.6 |
| escc/yscc/hrcc family type iii secretion system outer membrane ring protein | EPS91_16445 | Not Available | Negative | 3431372 - 3433075 | 62739.4 |
| helix-turn-helix domain-containing protein | EPS91_16450 | Not Available | Negative | 3433072 - 3433821 | 28286.4 |
| ghot/ortt family toxin | EPS91_16455 | Not Available | Negative | 3434167 - 3434346 | 6600.45 |
| hypothetical protein | EPS91_16460 | Not Available | Negative | 3434413 - 3436035 | 60896.2 |
| Trna-gly | Not Available | Not Available | Positive | 3436257 - 3436330 | Not Available |
| lysm peptidoglycan-binding domain-containing protein | EPS91_16470 | Not Available | Negative | 3436409 - 3437161 | 26452.9 |
| xanthine dehydrogenase molybdenum-binding subunit xdha | EPS91_16475 | Not Available | Positive | 3437577 - 3439874 | 82778.1 |
| xanthine dehydrogenase fad-binding subunit xdhb | EPS91_16480 | Not Available | Positive | 3439885 - 3440763 | 31560.6 |
| xanthine dehydrogenase iron sulfur-binding subunit xdhc | EPS91_16485 | Not Available | Positive | 3440760 - 3441239 | 16952.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





