Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoadenosine phosphosulfate reductase | EPS91_16375 | Not Available | Positive | 3418444 - 3419178 | 27957.3 |
| type i toxin-antitoxin system hok family toxin | EPS91_16385 | Not Available | Positive | 3419443 - 3419595 | 5603.15 |
| crispr-associated helicase/endonuclease cas3 | EPS91_16390 | Not Available | Positive | 3419790 - 3422489 | 101865.0 |
| type i-e crispr-associated protein cse2/casb | EPS91_16400 | Not Available | Positive | 3424138 - 3424674 | 20687.6 |
| type i-e crispr-associated protein cas7/cse4/casc | EPS91_16405 | Not Available | Positive | 3424689 - 3425744 | 38443.6 |
| type i-e crispr-associated protein cas5/casd | EPS91_16410 | Not Available | Positive | 3425755 - 3426501 | 28595.9 |
| type i-e crispr-associated protein cas6/cse3/case | EPS91_16415 | Not Available | Positive | 3426483 - 3427133 | 24755.6 |
| type i-e crispr-associated endonuclease cas1 | EPS91_16420 | Not Available | Positive | 3427130 - 3428053 | 33487.9 |
| type i-e crispr-associated endoribonuclease cas2 | EPS91_16425 | Not Available | Positive | 3428050 - 3428343 | 11004.4 |
| is5/is1182 family transposase | EPS91_16430 | Not Available | Positive | 3428456 - 3428622 | 6688.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





