Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secy-interacting protein | EPS91_16220 | Not Available | Positive | 3381295 - 3381840 | 20709.6 |
| yqcc family protein | EPS91_16225 | Not Available | Positive | 3382462 - 3382791 | 12821.2 |
| trna pseudouridine(65) synthase truc | EPS91_16230 | Not Available | Positive | 3382791 - 3383573 | 29667.5 |
| flavodoxin | EPS91_16235 | Not Available | Positive | 3383591 - 3384040 | 16314.2 |
| mfs transporter | EPS91_16240 | Not Available | Positive | 3384475 - 3385827 | 49111.0 |
| glucarate dehydratase | EPS91_16245 | Not Available | Positive | 3385829 - 3387169 | 48811.3 |
| glucarate dehydratase | EPS91_16250 | Not Available | Positive | 3387190 - 3388530 | 49142.9 |
| two-component sensor histidine kinase bara | EPS91_16255 | Not Available | Negative | 3388761 - 3391517 | 102460.0 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | EPS91_16260 | Not Available | Positive | 3391574 - 3392875 | 48087.1 |
| gtp pyrophosphokinase | EPS91_16265 | Not Available | Positive | 3392923 - 3395157 | 83880.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





