Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fuculokinase | EPS91_16170 | Not Available | Negative | 3367640 - 3369058 | 52249.6 |
| l-fucose isomerase | EPS91_16175 | Not Available | Negative | 3369167 - 3370942 | 64980.3 |
| l-fucose:h+ symporter permease | EPS91_16180 | Not Available | Negative | 3370975 - 3372291 | 47611.7 |
| l-fuculose-phosphate aldolase | EPS91_16185 | Not Available | Positive | 3372838 - 3373485 | 23758.7 |
| lactaldehyde reductase | EPS91_16190 | Not Available | Positive | 3373513 - 3374661 | 40501.6 |
| flap endonuclease xni | EPS91_16195 | Not Available | Negative | 3374766 - 3375521 | 28137.7 |
| l-serine ammonia-lyase | EPS91_16200 | Not Available | Negative | 3375633 - 3377000 | 48725.8 |
| haaap family serine/threonine permease | EPS91_16205 | Not Available | Negative | 3377058 - 3378347 | 46923.3 |
| log family protein | EPS91_16210 | Not Available | Negative | 3378903 - 3380267 | 50975.0 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | EPS91_16215 | Not Available | Negative | 3380379 - 3381227 | 32531.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





