Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter substrate-binding protein potd | EPS91_15350 | Not Available | Positive | 3218879 - 3219925 | 38825.0 |
| duf3592 domain-containing protein | EPS91_15355 | Not Available | Positive | 3219983 - 3220444 | 17477.0 |
| tpm domain-containing protein | EPS91_15360 | Not Available | Positive | 3220441 - 3221229 | 28927.7 |
| nad-dependent protein deacylase | EPS91_15365 | Not Available | Negative | 3221367 - 3222188 | 30938.2 |
| n-acetylglucosamine kinase | EPS91_15370 | Not Available | Negative | 3222204 - 3223115 | 33028.6 |
| lipoprotein-releasing abc transporter permease subunit lole | EPS91_15375 | Not Available | Negative | 3223144 - 3224388 | 45320.0 |
| lipoprotein-releasing abc transporter atp-binding protein lold | EPS91_15380 | Not Available | Negative | 3224388 - 3225089 | 25453.9 |
| lipoprotein-releasing abc transporter permease subunit lolc | EPS91_15385 | Not Available | Negative | 3225082 - 3226281 | 43278.6 |
| acyltransferase family protein | EPS91_15390 | Not Available | Positive | 3226542 - 3227615 | 40868.0 |
| transcription-repair coupling factor | EPS91_15395 | Not Available | Positive | 3227743 - 3231189 | 129955.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





