Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent helicase hrpb | EPS91_15245 | Not Available | Negative | 3199469 - 3201898 | 89370.4 |
| rna 2',3'-cyclic phosphodiesterase | EPS91_15250 | Not Available | Positive | 3201972 - 3202502 | 19956.1 |
| dna/rna nuclease sfsa | EPS91_15255 | Not Available | Positive | 3202517 - 3203221 | 26230.2 |
| rna polymerase-binding transcription factor dksa | EPS91_15260 | Not Available | Positive | 3203399 - 3203854 | 17528.7 |
| trna glutamyl-q(34) synthetase gluqrs | EPS91_15265 | Not Available | Positive | 3203891 - 3204817 | 34899.5 |
| polynucleotide adenylyltransferase pcnb | EPS91_15270 | Not Available | Positive | 3204856 - 3206274 | 54659.0 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | EPS91_15275 | Not Available | Positive | 3206271 - 3206750 | 17892.6 |
| fimbrial protein | EPS91_15280 | Not Available | Positive | 3207113 - 3207703 | 20302.9 |
| fimbrial chaperone | EPS91_15285 | Not Available | Positive | 3207812 - 3208552 | 26723.8 |
| outer membrane usher protein | EPS91_15290 | Not Available | Positive | 3208587 - 3211187 | 95768.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





