Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor ts | EPS91_15140 | Not Available | Negative | 3173374 - 3174225 | 30424.7 |
| 30s ribosomal protein s2 | EPS91_15145 | Not Available | Negative | 3174360 - 3175085 | 26745.2 |
| type i methionyl aminopeptidase | EPS91_15150 | Not Available | Positive | 3175453 - 3176247 | 29332.5 |
| bifunctional uridylyltransferase/uridylyl-removing protein glnd | EPS91_15155 | Not Available | Positive | 3176309 - 3178981 | 102253.0 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | EPS91_15160 | Not Available | Positive | 3179012 - 3179836 | 29892.8 |
| duf3461 family protein | EPS91_15165 | Not Available | Positive | 3180152 - 3180538 | 15097.0 |
| serine endoprotease degq | EPS91_15175 | Not Available | Negative | 3181905 - 3183329 | 49357.3 |
| dgtpase | EPS91_15180 | Not Available | Negative | 3183459 - 3184976 | 59386.2 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | EPS91_15185 | Not Available | Positive | 3185060 - 3185758 | 24355.4 |
| vitamin b12 abc transporter substrate-binding protein btuf | EPS91_15190 | Not Available | Positive | 3185751 - 3186551 | 29368.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





