Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein localization protein lolb | EPS91_14840 | Not Available | Negative | 3111561 - 3112184 | 23567.2 |
| glutamyl-trna reductase | EPS91_14845 | Not Available | Positive | 3112398 - 3113654 | 46266.4 |
| peptide chain release factor 1 | EPS91_14850 | Not Available | Positive | 3113696 - 3114778 | 40519.6 |
| peptide chain release factor n(5)-glutamine methyltransferase | EPS91_14855 | Not Available | Positive | 3114778 - 3115611 | 30911.6 |
| sirb family protein | EPS91_14860 | Not Available | Positive | 3115608 - 3116000 | 14625.7 |
| tetratricopeptide repeat-containing protein | EPS91_14865 | Not Available | Positive | 3116004 - 3116813 | 30843.1 |
| 3-deoxy-8-phosphooctulonate synthase | EPS91_14870 | Not Available | Positive | 3116849 - 3117703 | 30776.5 |
| small toxic polypeptide ldra/ldrc | EPS91_14875 | Not Available | Negative | 3117851 - 3117958 | 4042.09 |
| small toxic polypeptide ldra/ldrc | EPS91_14880 | Not Available | Negative | 3118386 - 3118493 | 4042.09 |
| sodium-potassium/proton antiporter chaa | EPS91_14885 | Not Available | Negative | 3118899 - 3119999 | 39180.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





