Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane-bound lytic murein transglycosylase emta | EPS91_14730 | Not Available | Positive | 3089088 - 3089699 | 22212.8 |
| flagellar brake protein | EPS91_14735 | Not Available | Negative | 3089701 - 3090435 | 27809.8 |
| glsb/yeaq/ymge family stress response membrane protein | EPS91_14740 | Not Available | Positive | 3090636 - 3090890 | 8717.3 |
| tonb-dependent receptor | EPS91_14745 | Not Available | Negative | 3090940 - 3092910 | 73506.0 |
| modd protein | EPS91_14750 | Not Available | Negative | 3092936 - 3093790 | 30555.8 |
| class i sam-dependent methyltransferase | EPS91_14755 | Not Available | Negative | 3093787 - 3094599 | 30937.3 |
| abc transporter atp-binding protein | EPS91_14760 | Not Available | Negative | 3094609 - 3095367 | 27502.9 |
| iron abc transporter permease | EPS91_14765 | Not Available | Negative | 3095364 - 3096344 | 34825.0 |
| iron abc transporter substrate-binding protein | EPS91_14770 | Not Available | Negative | 3096344 - 3097366 | 37722.4 |
| dihydroxyacetone kinase subunit dham | EPS91_14785 | Not Available | Negative | 3099711 - 3101129 | 51570.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





