Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h nitroreductase | EPS91_14455 | Not Available | Positive | 3038986 - 3039537 | 20073.2 |
| selenide, water dikinase seld | EPS91_14460 | Not Available | Positive | 3039654 - 3040697 | 36674.5 |
| dna topoisomerase iii | EPS91_14465 | Not Available | Positive | 3040702 - 3042657 | 73157.0 |
| nadp-specific glutamate dehydrogenase | EPS91_14470 | Not Available | Negative | 3042734 - 3044077 | 48558.1 |
| duf1496 domain-containing protein | EPS91_14475 | Not Available | Positive | 3044313 - 3044585 | 9928.93 |
| pyrimidine (deoxy)nucleoside triphosphate diphosphatase | EPS91_14480 | Not Available | Negative | 3044551 - 3044958 | 15056.0 |
| cdp-alcohol phosphatidyltransferase family protein | EPS91_14485 | Not Available | Positive | 3045045 - 3045665 | 22597.9 |
| abc transporter permease | EPS91_14500 | Not Available | Negative | 3047481 - 3049016 | 56163.0 |
| abc transporter substrate-binding protein | EPS91_14505 | Not Available | Negative | 3048989 - 3050155 | 42962.8 |
| carboxymuconolactone decarboxylase family protein | EPS91_14510 | Not Available | Negative | 3050165 - 3050713 | 20612.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





