Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EPS91_14305 | Not Available | Negative | 3008788 - 3008886 | 3458.45 |
| diguanylate cyclase dgcp | EPS91_14310 | Not Available | Negative | 3008919 - 3009944 | 38512.8 |
| duf333 domain-containing protein | EPS91_14315 | Not Available | Positive | 3010127 - 3010381 | 8942.87 |
| duf488 domain-containing protein | EPS91_14320 | Not Available | Negative | 3010403 - 3010750 | 13355.9 |
| 2-nitroimidazole transporter | EPS91_14325 | Not Available | Negative | 3010805 - 3011986 | 41211.8 |
| arac family transcriptional regulator | EPS91_14330 | Not Available | Positive | 3012083 - 3012904 | 30613.4 |
| duf441 domain-containing protein | EPS91_14335 | Not Available | Negative | 3012861 - 3013307 | 15256.6 |
| hypothetical protein | EPS91_14340 | Not Available | Positive | 3013477 - 3013581 | 3771.77 |
| ybak/prolyl-trna synthetase associated domain-containing protein | EPS91_14345 | Not Available | Negative | 3013582 - 3014085 | 17850.7 |
| ggdef domain-containing protein | EPS91_14350 | Not Available | Negative | 3014128 - 3015618 | 56580.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





