Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease d | EPS91_14250 | Not Available | Positive | 2999456 - 3000571 | 42200.0 |
| carnitine monooxygenase subunit yeax | EPS91_14255 | Not Available | Negative | 3000625 - 3001590 | 35772.2 |
| carnitine monooxygenase subunit yeaw | EPS91_14260 | Not Available | Negative | 3001646 - 3002770 | 42563.0 |
| multifunctional d-malate/3-isopropylmalate/tartarate dehydrogenase | EPS91_14270 | Not Available | Negative | 3004662 - 3005747 | 40264.1 |
| lysr family transcriptional regulator | EPS91_14275 | Not Available | Positive | 3005850 - 3006773 | 34646.8 |
| leucine efflux protein leue | EPS91_14280 | Not Available | Positive | 3006900 - 3007538 | 23259.0 |
| duf1971 domain-containing protein | EPS91_14285 | Not Available | Positive | 3007711 - 3008070 | 13612.2 |
| duf1869 domain-containing protein | EPS91_14290 | Not Available | Positive | 3008074 - 3008256 | 6608.63 |
| glsb/yeaq/ymge family stress response membrane protein | EPS91_14295 | Not Available | Positive | 3008404 - 3008652 | 8671.14 |
| protein yoaj | EPS91_14300 | Not Available | Negative | 3008711 - 3008785 | 2691.57 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





