Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-serine ammonia-lyase | EPS91_14200 | Not Available | Negative | 2989141 - 2990505 | 48881.4 |
| coa pyrophosphatase | EPS91_14205 | Not Available | Negative | 2990689 - 2991267 | 21495.0 |
| aminodeoxychorismate synthase component 1 | EPS91_14210 | Not Available | Negative | 2991271 - 2992632 | 51016.3 |
| yoah family protein | EPS91_14215 | Not Available | Positive | 2992706 - 2992885 | 6554.7 |
| duf1889 family protein | EPS91_14220 | Not Available | Negative | 2993005 - 2993364 | 13244.0 |
| rida family protein | EPS91_14225 | Not Available | Negative | 2993725 - 2994069 | 12521.9 |
| atp-dependent dna helicase | EPS91_14230 | Not Available | Positive | 2994201 - 2996111 | 70396.0 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | EPS91_14235 | Not Available | Positive | 2996169 - 2996864 | 25101.2 |
| slp family lipoprotein yeay | EPS91_14240 | Not Available | Positive | 2996903 - 2997484 | 20924.3 |
| long-chain-fatty-acid--coa ligase fadd | EPS91_14245 | Not Available | Positive | 2997689 - 2999374 | 62349.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





