Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 fimbrial protein | EPS91_13995 | Not Available | Positive | 2949352 - 2949867 | 18343.7 |
| fimbrial chaperone | EPS91_14000 | Not Available | Positive | 2949860 - 2950570 | 25876.2 |
| quinone-dependent dihydroorotate dehydrogenase | EPS91_14005 | Not Available | Positive | 2950681 - 2951691 | 36775.7 |
| cell division protein zapc | EPS91_14010 | Not Available | Positive | 2951865 - 2952407 | 20589.9 |
| 6-n-hydroxylaminopurine resistance protein ycbx | EPS91_14015 | Not Available | Negative | 2952404 - 2953513 | 40593.5 |
| bifunctional 23s rrna (guanine(2069)-n(7))-methyltransferase rlmk/23s rrna (guanine(2445)-n(2))-methyltransferase rlml | EPS91_14020 | Not Available | Positive | 2953611 - 2955719 | 78840.6 |
| abc transporter atp-binding protein | EPS91_14025 | Not Available | Positive | 2955731 - 2957638 | 72115.1 |
| membrane integrity-associated transporter subunit pqia | EPS91_14030 | Not Available | Positive | 2957768 - 2959021 | 46436.2 |
| intermembrane transport protein pqib | EPS91_14035 | Not Available | Positive | 2959026 - 2960666 | 60497.0 |
| membrane integrity-associated transporter subunit pqic | EPS91_14040 | Not Available | Positive | 2960663 - 2961226 | 20681.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





