Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine abc transporter permease | EPS91_13795 | Not Available | Positive | 2900347 - 2901006 | 24365.8 |
| glutamine abc transporter atp-binding protein glnq | EPS91_13800 | Not Available | Positive | 2901003 - 2901725 | 26733.6 |
| mechanosensitive channel protein | EPS91_13805 | Not Available | Positive | 2901842 - 2904067 | 81933.5 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | EPS91_13810 | Not Available | Negative | 2904064 - 2905080 | 37827.3 |
| duf1471 domain-containing protein | EPS91_13815 | Not Available | Positive | 2905266 - 2905526 | 8908.71 |
| tonb-dependent receptor | EPS91_13820 | Not Available | Positive | 2905791 - 2906123 | 11762.8 |
| metalloprotease | EPS91_13825 | Not Available | Positive | 2906367 - 2907131 | 26738.7 |
| (d)cmp kinase | EPS91_13830 | Not Available | Positive | 2907304 - 2907987 | 24747.8 |
| 30s ribosomal protein s1 | EPS91_13835 | Not Available | Positive | 2908098 - 2909771 | 61161.5 |
| integration host factor subunit beta | EPS91_13840 | Not Available | Positive | 2909931 - 2910215 | 10651.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





