Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter substrate-binding protein potf | EPS91_13545 | Not Available | Negative | 2846631 - 2847743 | 40885.7 |
| ybjn domain-containing protein | EPS91_13550 | Not Available | Negative | 2848094 - 2848570 | 17667.1 |
| 30s ribosomal protein s6--l-glutamate ligase | EPS91_13555 | Not Available | Negative | 2848658 - 2849560 | 32563.7 |
| nitroreductase nfsa | EPS91_13560 | Not Available | Negative | 2849621 - 2850343 | 26834.2 |
| duf1418 family protein | EPS91_13565 | Not Available | Negative | 2850327 - 2850614 | 10479.3 |
| grxa family glutaredoxin | EPS91_13570 | Not Available | Positive | 2850774 - 2851031 | 9695.39 |
| hypothetical protein | EPS91_13575 | Not Available | Negative | 2851061 - 2851438 | 14204.0 |
| transporter | EPS91_13580 | Not Available | Positive | 2851708 - 2853393 | 60355.1 |
| tetr/acrr family transcriptional regulator | EPS91_13585 | Not Available | Negative | 2853568 - 2854104 | 20397.7 |
| mfs transporter | EPS91_13590 | Not Available | Positive | 2854188 - 2855396 | 41869.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





