Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine abc transporter atp-binding protein artp | EPS91_13495 | Not Available | Positive | 2837882 - 2838610 | 27023.7 |
| arginine abc transporter substrate-binding protein | EPS91_13500 | Not Available | Positive | 2838628 - 2839359 | 26961.0 |
| arginine abc transporter permease artq | EPS91_13505 | Not Available | Positive | 2839366 - 2840082 | 26162.5 |
| arginine abc transporter permease artm | EPS91_13510 | Not Available | Positive | 2840082 - 2840750 | 24929.3 |
| arginine abc transporter substrate-binding protein | EPS91_13515 | Not Available | Positive | 2840976 - 2841707 | 26857.9 |
| 23s rrna (uracil(747)-c(5))-methyltransferase rlmc | EPS91_13520 | Not Available | Negative | 2841882 - 2843009 | 41959.1 |
| duf2593 family protein | EPS91_13525 | Not Available | Negative | 2843050 - 2843538 | 18519.1 |
| putrescine abc transporter permease poti | EPS91_13530 | Not Available | Negative | 2843598 - 2844443 | 30528.4 |
| putrescine abc transporter permease poth | EPS91_13535 | Not Available | Negative | 2844440 - 2845393 | 35457.6 |
| putrescine abc transporter atp-binding subunit potg | EPS91_13540 | Not Available | Negative | 2845403 - 2846536 | 41981.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





