Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Antitermination protein q | EPS91_23470 | Not Available | Positive | 4772782 - 4773534 | 27927.8 |
| hypothetical protein | EPS91_23475 | Not Available | Negative | 4773812 - 4773901 | 3193.12 |
| cold shock-like protein cspf | EPS91_23480 | Not Available | Negative | 4773956 - 4774168 | 7563.18 |
| Csp | EPS91_23485 | Not Available | Positive | 4774469 - 4774684 | 7717.12 |
| Holin protein | EPS91_23490 | Not Available | Positive | 4775438 - 4775653 | 7741.44 |
| Hypothetical protein | EPS91_23495 | Not Available | Positive | 4775658 - 4775969 | 12091.3 |
| Endolysin | EPS91_23500 | Not Available | Positive | 4775966 - 4776499 | 19663.6 |
| Phage-tail assembly-like protein | EPS91_23505 | Not Available | Positive | 4776496 - 4776993 | 18310.8 |
| Csp | EPS91_23510 | Not Available | Positive | 4777356 - 4777568 | 7684.14 |
| cold-shock protein | EPS91_23515 | Not Available | Positive | 4777579 - 4777767 | 7141.65 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





