Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase dbpa | EPS91_13385 | Not Available | Positive | 2817030 - 2818403 | 49302.9 |
| trna 2-thiocytidine(32) synthetase ttca | EPS91_13390 | Not Available | Negative | 2818532 - 2819467 | 35516.9 |
| duf3596 domain-containing protein | EPS91_13395 | Not Available | Negative | 2819519 - 2820754 | 47572.8 |
| hypothetical protein | EPS91_13400 | Not Available | Negative | 2820756 - 2820971 | 8456.25 |
| duf1187 family protein | EPS91_13405 | Not Available | Negative | 2821071 - 2821259 | 7045.5 |
| type i toxin-antitoxin system endodeoxyribonuclease toxin ralr | EPS91_13410 | Not Available | Negative | 2821252 - 2821446 | 7047.31 |
| recombination protein rect | EPS91_13415 | Not Available | Negative | 2821503 - 2822312 | 29696.7 |
| hypothetical protein | EPS91_13425 | Not Available | Negative | 2823868 - 2823928 | 2293.74 |
| lysine exporter lyso family protein | EPS91_13430 | Not Available | Positive | 2824256 - 2825155 | 32404.3 |
| hydroxylamine reductase | EPS91_13435 | Not Available | Positive | 2825299 - 2826951 | 60090.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





