Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate/nitrate reduction transcriptional regulator fnr | EPS91_13335 | Not Available | Negative | 2806293 - 2807045 | 27968.9 |
| methylated-dna--[protein]-cysteine s-methyltransferase | EPS91_13340 | Not Available | Negative | 2807240 - 2807755 | 19208.3 |
| p-aminobenzoyl-glutamate transporter | EPS91_13345 | Not Available | Negative | 2807766 - 2809292 | 54994.3 |
| amidohydrolase | EPS91_13350 | Not Available | Negative | 2809329 - 2810774 | 52225.4 |
| amidohydrolase | EPS91_13355 | Not Available | Negative | 2810774 - 2812084 | 46695.0 |
| lysr family transcriptional regulator | EPS91_13360 | Not Available | Positive | 2812260 - 2813168 | 34075.2 |
| dna endonuclease smra | EPS91_13365 | Not Available | Positive | 2813498 - 2814061 | 21522.7 |
| diguanylate cyclase dgcm | EPS91_13370 | Not Available | Negative | 2814082 - 2815314 | 46483.9 |
| zinc transporter zntb | EPS91_13375 | Not Available | Positive | 2815569 - 2816552 | 36614.3 |
| hypothetical protein | EPS91_13380 | Not Available | Negative | 2816841 - 2817071 | 7515.82 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





