Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | EPS91_13280 | Not Available | Negative | 2794123 - 2795121 | 36192.3 |
| ycjx family protein | EPS91_13285 | Not Available | Positive | 2795277 - 2796674 | 52606.5 |
| tigr01620 family protein | EPS91_13290 | Not Available | Positive | 2796671 - 2797732 | 39352.4 |
| transcriptional regulator tyrr | EPS91_13295 | Not Available | Positive | 2797880 - 2799421 | 57671.5 |
| thiol peroxidase | EPS91_13300 | Not Available | Negative | 2799465 - 2799971 | 17836.3 |
| murein tripeptide amidase mpaa | EPS91_13310 | Not Available | Negative | 2801034 - 2801762 | 26496.3 |
| peptide abc transporter substrate-binding protein | EPS91_13315 | Not Available | Positive | 2801945 - 2803558 | 59917.3 |
| mechanosensitive ion channel family protein | EPS91_13320 | Not Available | Negative | 2803609 - 2804640 | 38769.9 |
| duf2534 family protein | EPS91_13325 | Not Available | Positive | 2804884 - 2805141 | 9339.82 |
| universal stress protein uspe | EPS91_13330 | Not Available | Negative | 2805191 - 2806141 | 35708.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





