Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase family protein | EPS91_12960 | Not Available | Positive | 2729968 - 2730528 | 20228.4 |
| hypothetical protein | EPS91_12965 | Not Available | Positive | 2730542 - 2731390 | 31563.7 |
| hypothetical protein | EPS91_12970 | Not Available | Negative | 2731441 - 2731938 | 18190.7 |
| xre family transcriptional regulator | EPS91_12975 | Not Available | Positive | 2732179 - 2732643 | 16969.1 |
| duf4102 domain-containing protein | EPS91_12980 | Not Available | Positive | 2733321 - 2734577 | 48237.4 |
| hypothetical protein | EPS91_12990 | Not Available | Negative | 2736491 - 2736549 | 2206.66 |
| hypothetical protein | EPS91_12995 | Not Available | Positive | 2736550 - 2736609 | 2293.74 |
| hypothetical protein | EPS91_13000 | Not Available | Positive | 2736698 - 2737006 | 11733.0 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | EPS91_13005 | Not Available | Negative | 2737059 - 2737649 | 22008.2 |
| ycik family oxidoreductase | EPS91_13010 | Not Available | Negative | 2737646 - 2738404 | 27934.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





