Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | EPS91_12745 | Not Available | Positive | 2684803 - 2686176 | 49882.0 |
| ribosome-associated protein | EPS91_12750 | Not Available | Negative | 2686332 - 2686883 | 21360.5 |
| metalloprotease pmba | EPS91_12755 | Not Available | Positive | 2686977 - 2688329 | 48372.4 |
| cytochrome b562 | EPS91_12760 | Not Available | Positive | 2688513 - 2688899 | 14109.8 |
| type ii toxin-antitoxin system relb/dinj family antitoxin | EPS91_12770 | Not Available | Positive | 2689090 - 2689329 | 9012.92 |
| anaerobic ribonucleoside-triphosphate reductase-activating protein | EPS91_12775 | Not Available | Negative | 2689330 - 2689794 | 17446.9 |
| anaerobic ribonucleoside-triphosphate reductase | EPS91_12780 | Not Available | Negative | 2689984 - 2692122 | 79999.9 |
| alpha,alpha-phosphotrehalase | EPS91_12785 | Not Available | Negative | 2692516 - 2694171 | 63819.1 |
| pts trehalose transporter subunit iibc | EPS91_12790 | Not Available | Negative | 2694221 - 2695642 | 51105.0 |
| hth-type transcriptional regulator trer | EPS91_12795 | Not Available | Negative | 2695761 - 2696708 | 34575.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





