Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | EPS91_12645 | Not Available | Negative | 2662196 - 2663056 | 29827.3 |
| transcriptional regulator | EPS91_12650 | Not Available | Positive | 2663145 - 2663525 | 14094.0 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase | EPS91_12655 | Not Available | Negative | 2663643 - 2665586 | 70836.9 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | EPS91_12660 | Not Available | Positive | 2665776 - 2666516 | 27191.4 |
| hypothetical protein | EPS91_12665 | Not Available | Positive | 2666728 - 2667666 | 35951.9 |
| ytfj family protein | EPS91_12670 | Not Available | Negative | 2667729 - 2668283 | 20495.7 |
| duf1107 domain-containing protein | EPS91_12675 | Not Available | Positive | 2668608 - 2668814 | 8072.24 |
| hlyc/corc family transporter | EPS91_12680 | Not Available | Negative | 2668893 - 2670236 | 49765.6 |
| peptide-methionine (s)-s-oxide reductase msra | EPS91_12685 | Not Available | Negative | 2670559 - 2671197 | 23320.4 |
| autotransporter assembly complex protein tama | EPS91_12690 | Not Available | Positive | 2671403 - 2673136 | 64841.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





