Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl coa:acetate/3-ketoacid coa transferase | EPS91_12595 | Not Available | Negative | 2652287 - 2653828 | 55589.7 |
| enoyl-coa hydratase/isomerase family protein | EPS91_12600 | Not Available | Negative | 2653838 - 2654614 | 28603.6 |
| sugar phosphate isomerase/epimerase | EPS91_12605 | Not Available | Negative | 2654624 - 2655466 | 31070.2 |
| 3-ketoacyl-acp reductase | EPS91_12610 | Not Available | Negative | 2655476 - 2656267 | 28508.5 |
| tetr/acrr family transcriptional regulator | EPS91_12615 | Not Available | Positive | 2656480 - 2657127 | 24877.8 |
| cell division protein ytfb | EPS91_12620 | Not Available | Negative | 2657111 - 2657749 | 23607.1 |
| peptidylprolyl isomerase | EPS91_12625 | Not Available | Positive | 2657967 - 2658587 | 22213.5 |
| d-serine/d-alanine/glycine transporter | EPS91_12630 | Not Available | Positive | 2658896 - 2660308 | 51662.6 |
| iron-sulfur cluster repair protein ytfe | EPS91_12635 | Not Available | Negative | 2660353 - 2661015 | 24898.1 |
| dmt family transporter | EPS91_12640 | Not Available | Negative | 2661123 - 2662088 | 35283.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





