Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EPS91_12545 | Not Available | Negative | 2642570 - 2643472 | 32976.0 |
| hypothetical protein | EPS91_12550 | Not Available | Negative | 2643457 - 2643672 | 7830.56 |
| hypothetical protein | EPS91_12555 | Not Available | Positive | 2643796 - 2644140 | 13497.9 |
| para family protein | EPS91_12560 | Not Available | Negative | 2644134 - 2645012 | 32046.8 |
| hypothetical protein | EPS91_12565 | Not Available | Negative | 2645170 - 2645352 | 6666.01 |
| duf4102 domain-containing protein | EPS91_12570 | Not Available | Positive | 2645312 - 2646577 | 47949.1 |
| tetratricopeptide repeat protein | EPS91_12575 | Not Available | Positive | 2646833 - 2647665 | 31884.7 |
| duf2686 family protein | EPS91_12580 | Not Available | Negative | 2647783 - 2648577 | 29690.0 |
| mfs transporter | EPS91_12585 | Not Available | Negative | 2648848 - 2650125 | 46851.8 |
| fad-binding protein | EPS91_12590 | Not Available | Negative | 2650218 - 2652290 | 75656.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





