Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | EPS91_12445 | Not Available | Negative | 2626312 - 2626560 | 9251.02 |
| rpn family recombination-promoting nuclease/putative transposase | EPS91_12450 | Not Available | Negative | 2626738 - 2627673 | 35583.8 |
| single-stranded dna-binding protein | EPS91_12455 | Not Available | Negative | 2627720 - 2628277 | 19941.8 |
| hypothetical protein | EPS91_12460 | Not Available | Negative | 2628290 - 2628493 | 7611.87 |
| duf3577 domain-containing protein | EPS91_12465 | Not Available | Negative | 2628587 - 2629051 | 16963.1 |
| dna topoisomerase iii | EPS91_12470 | Not Available | Negative | 2629757 - 2631769 | 74579.0 |
| tigr03761 family integrating conjugative element protein | EPS91_12475 | Not Available | Negative | 2631782 - 2632462 | 24995.0 |
| helix-turn-helix domain-containing protein | EPS91_12480 | Not Available | Negative | 2633100 - 2634386 | 47463.9 |
| hypothetical protein | EPS91_12485 | Not Available | Negative | 2634650 - 2634877 | 8505.88 |
| hypothetical protein | EPS91_12490 | Not Available | Negative | 2634874 - 2635089 | 7693.74 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





