Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr03757 family integrating conjugative element protein | EPS91_12340 | Not Available | Negative | 2609385 - 2609783 | 14638.5 |
| acetyltransferase | EPS91_12345 | Not Available | Negative | 2610048 - 2610434 | 14676.9 |
| conjugative transfer atpase | EPS91_12350 | Not Available | Negative | 2610431 - 2613247 | 105241.0 |
| tigr03751 family conjugal transfer lipoprotein | EPS91_12355 | Not Available | Negative | 2613247 - 2613660 | 15403.5 |
| tigr03752 family integrating conjugative element protein | EPS91_12360 | Not Available | Negative | 2613678 - 2615156 | 52476.2 |
| tigr03749 family integrating conjugative element protein | EPS91_12365 | Not Available | Negative | 2615146 - 2616054 | 32556.3 |
| tigr03746 family integrating conjugative element protein | EPS91_12370 | Not Available | Negative | 2616051 - 2616698 | 24776.8 |
| tigr03750 family conjugal transfer protein | EPS91_12375 | Not Available | Negative | 2616695 - 2617060 | 13559.7 |
| tigr03745 family integrating conjugative element membrane protein | EPS91_12380 | Not Available | Negative | 2617080 - 2617457 | 12898.3 |
| tigr03758 family integrating conjugative element protein | EPS91_12385 | Not Available | Negative | 2617488 - 2617730 | 8709.66 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





