Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | EPS91_12280 | Not Available | Negative | 2600261 - 2601178 | 34474.5 |
| hypothetical protein | EPS91_12285 | Not Available | Positive | 2602370 - 2603041 | 26255.4 |
| colicin immunity protein | EPS91_12290 | Not Available | Positive | 2603231 - 2603482 | 9997.27 |
| hok/gef family protein | EPS91_12300 | Not Available | Negative | 2603916 - 2604056 | 5442.01 |
| 50s ribosomal protein l31 | EPS91_12310 | Not Available | Negative | 2604358 - 2604636 | 10285.2 |
| hypothetical protein | EPS91_12315 | Not Available | Positive | 2604787 - 2605071 | 10403.2 |
| conjugal transfer protein trag | EPS91_12320 | Not Available | Negative | 2605117 - 2606619 | 55032.6 |
| hypothetical protein | EPS91_12325 | Not Available | Negative | 2606623 - 2606988 | 13794.4 |
| integrating conjugative element protein | EPS91_12330 | Not Available | Negative | 2606981 - 2608402 | 50521.4 |
| tigr03756 family integrating conjugative element protein | EPS91_12335 | Not Available | Negative | 2608414 - 2609388 | 34861.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





