Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EPS91_12100 | Not Available | Positive | 2569541 - 2570212 | 24924.9 |
| pilus assembly protein pilm | EPS91_12105 | Not Available | Positive | 2570213 - 2570647 | 16269.7 |
| piln family type ivb pilus formation outer membrane protein | EPS91_12110 | Not Available | Positive | 2570897 - 2572498 | 57306.2 |
| pilus assembly protein | EPS91_12115 | Not Available | Positive | 2572522 - 2573817 | 48445.4 |
| type iv pilus biogenesis protein pilp | EPS91_12120 | Not Available | Positive | 2573807 - 2574268 | 16492.8 |
| type ii secretion protein e | EPS91_12125 | Not Available | Positive | 2574278 - 2575798 | 56588.9 |
| type ii secretion protein f | EPS91_12130 | Not Available | Positive | 2575800 - 2576900 | 41223.8 |
| prepilin-type cleavage/methylation domain-containing protein | EPS91_12135 | Not Available | Positive | 2576952 - 2577485 | 19483.4 |
| prepilin peptidase | EPS91_12145 | Not Available | Positive | 2577739 - 2578389 | 23538.7 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | EPS91_12150 | Not Available | Positive | 2578386 - 2579714 | 48299.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





